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Trudy Matematicheskogo Instituta imeni V.A. Steklova, 2014, Volume 285, Pages 9–32
DOI: https://doi.org/10.1134/S0371968514020022
(Mi tm3553)
 

This article is cited in 15 scientific papers (total in 15 papers)

Ultrametric random walk and dynamics of protein molecules

V. A. Avetisova, A. Kh. Bikulova, A. P. Zubarevbc

a N. N. Semenov Institute of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
b S. P. Korolyov Samara State Aerospace University, Samara, Russia
c Samara State Transport University, Samara, Russia
References:
Abstract: This paper is a brief survey of applications of the $p$-adic equation of ultrametric random walk to the description of conformational dynamics of protein molecules. Two main experiments are considered that determine the properties of the fluctuation dynamic mobility of protein molecules from $300$ to $4$ K: the studies of the kinetics of CO binding to myoglobin and spectral diffusion in proteins. It is shown that an ultrametric description allows one to build a unified picture of the conformational mobility of a protein molecule in the whole range of the indicated temperatures and realize the fact that it varies in a self-similar way. This feature of protein molecules, which has remained hidden to date, significantly expands the idea of the structure of nanoscale systems related to the family of molecular machines.
Received in September 2013
English version:
Proceedings of the Steklov Institute of Mathematics, 2014, Volume 285, Pages 3–25
DOI: https://doi.org/10.1134/S0081543814040026
Bibliographic databases:
Document Type: Article
Language: Russian
Citation: V. A. Avetisov, A. Kh. Bikulov, A. P. Zubarev, “Ultrametric random walk and dynamics of protein molecules”, Selected topics of mathematical physics and analysis, Collected papers. In commemoration of the 90th anniversary of Academician Vasilii Sergeevich Vladimirov's birth, Trudy Mat. Inst. Steklova, 285, MAIK Nauka/Interperiodica, Moscow, 2014, 9–32; Proc. Steklov Inst. Math., 285 (2014), 3–25
Citation in format AMSBIB
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\by V.~A.~Avetisov, A.~Kh.~Bikulov, A.~P.~Zubarev
\paper Ultrametric random walk and dynamics of protein molecules
\inbook Selected topics of mathematical physics and analysis
\bookinfo Collected papers. In commemoration of the 90th anniversary of Academician Vasilii Sergeevich Vladimirov's birth
\serial Trudy Mat. Inst. Steklova
\yr 2014
\vol 285
\pages 9--32
\publ MAIK Nauka/Interperiodica
\publaddr Moscow
\mathnet{http://mi.mathnet.ru/tm3553}
\crossref{https://doi.org/10.1134/S0371968514020022}
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\pages 3--25
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  • This publication is cited in the following 15 articles:
    Citing articles in Google Scholar: Russian citations, English citations
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    Труды Математического института имени В. А. Стеклова Proceedings of the Steklov Institute of Mathematics
     
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