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Matematicheskaya Biologiya i Bioinformatika, 2011, Volume 6, Issue 1, Pages 23–38 (Mi mbb63)  

This article is cited in 1 scientific paper (total in 1 paper)

Proceedings of The International Conference "Mathematical Biology and Bioinformatics"

Electronic structure of the active site of truncated hemoglobin $\mathrm N$ in MCSCF approach

K. V. Simon, A. V. Tulub

Saint-Petersburg State University
Full-text PDF (700 kB) Citations (1)
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Abstract: The MCSCF approach with the geometry optimization is applied to the calculation of electronic properties of active site of heme $\mathrm{trHbN}$ including ($\mathrm{ONOO}$) functional group and two water molecules. The localized molecular orbitals are employed as a starting set. Two subspaces of full interaction (CAS) have been used by the construction of MCSCF wavefunction, the first one includes 3d orbitals of iron atom and the second contains bonding and antibonding molecular orbitals (MOs) of peroxynitrite with one unshared electronic pair of the $\mathrm O_2$ fragment. The geometry of the anionic $\mathrm{(ONOO)}^-$ structures arising due to the charge transfer from $\mathrm{Fe(II)}$ are close to that of nitrate anion and peroxynitrite in gas phase. The peroxynitrite is considered in its turn in two different forms corresponding to singlet and triplet states of this anion in the gas phase. The possible role of peroxynitrite structure is discussed in a connection with the defense reaction of M. tuberculosis.
Key words: tubercular bacillus defense reaction, electronic structure of heme active center, multiconfiguration self-consistent field (MCSCF) wavefunctions.
Received 30.12.2010, Published 31.01.2011
Document Type: Article
Language: English
Citation: K. V. Simon, A. V. Tulub, “Electronic structure of the active site of truncated hemoglobin $\mathrm N$ in MCSCF approach”, Mat. Biolog. Bioinform., 6:1 (2011), 23–38
Citation in format AMSBIB
\Bibitem{SimTul11}
\by K.~V.~Simon, A.~V.~Tulub
\paper Electronic structure of the active site of truncated hemoglobin~$\mathrm N$ in MCSCF approach
\jour Mat. Biolog. Bioinform.
\yr 2011
\vol 6
\issue 1
\pages 23--38
\mathnet{http://mi.mathnet.ru/mbb63}
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  • This publication is cited in the following 1 articles:
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