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Matematicheskaya Biologiya i Bioinformatika, 2022, Volume 17, Issue 2, Pages 289–311
DOI: https://doi.org/10.17537/2022.17.289 (Mi mbb490) 		 
This article is cited in 2 scientific papers (total in 2 papers)

Bioinformatics

On classification and taxonomy of coronaviruses (Riboviria, Nidovirales, Coronaviridae) with special focus on severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2)

E. V. Mavrodieva, M. L. Turskybc, N. E. Mavrodievd, L. Schrodere, A. P. Laktionovf, M. C. Ebachg, D. M. Williamsh

a University of Florida, Florida Museum of Natural History, Museum Road and Newell Drive, Dickinson Hall, 301, Gainesville, FL, 32611, USA
b St Vincent’s Centre for Applied Medical Research and Department of Hematology and BM Transplant, St Vincent’s Hospital, Sydney; NSW, 2010; Australia
c School of Clinical Medicine, Faculty of Medicine and Health; UNSW Sydney; NSW, 2010; Australia
d Santa Fe College, Gainesville, Florida, 3000 NW 83 St, Gainesville, FL 32606
e University of Alaska Anchorage, WWAMI, College of Health, 3211 Providence Drive, HSB 301, Anchorage, AK, 99508, USA
f Astrakhan State University, Department of Biology, Shaumyan's Square, Building 1, Astrakhan, 414000, Russia
g Paleontology, Geobiology and Earth Archives Research Centre (PANGEA), School of Biological, Earth and Environmental Sciences, UNSW, Kensington, NSW, 2052 Australia
h The Natural History Museum, London, SW7 5BD, UK
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DOI: https://doi.org/10.17537/2022.17.289
Abstract: Coronaviruses are highly virulent and therefore important human and veterinary pathogens worldwide. This study presents the first natural hierarchical classification of Coronaviridae. We also demonstrate a “one-step” solution to incorporate the principles of binomial (binary) nomenclature into taxonomy of Coronaviridae. We strongly support the complete rejection of the non-taxonomic category “virus” in any future taxonomic study in virology. This will aid future recognition of numerous virus species, particularly in the currently monotypic subgenus Sarbecovirus. Commenting on the nature of SARS-CoV-2, the authors emphasize that no member of the Sarbecovirus clade is an ancestor of this virus, and humans are the only natural known host.
Key words: Coronaviridae, cladistics, rooted phylogenetic trees, taxonomy, binominal nomenclature, generic circumscription, SARS-CoV-2.
Received 03.08.2022, 06.11.2022, Published 16.11.2022
Bibliographic databases:
Document Type: Article
Language: English
Citation: E. V. Mavrodiev, M. L. Tursky, N. E. Mavrodiev, L. Schroder, A. P. Laktionov, M. C. Ebach, D. M. Williams, “On classification and taxonomy of coronaviruses (Riboviria, Nidovirales, Coronaviridae) with special focus on severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2)”, Mat. Biolog. Bioinform., 17:2 (2022), 289–311
Citation in format AMSBIB
\Bibitem{MavTurMav22}
\by E.~V.~Mavrodiev, M.~L.~Tursky, N.~E.~Mavrodiev, L.~Schroder, A.~P.~Laktionov, M.~C.~Ebach, D.~M.~Williams
\paper On classification and taxonomy of coronaviruses (\emph{Riboviria, Nidovirales, Coronaviridae}) with special focus on severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2)
\jour Mat. Biolog. Bioinform.
\yr 2022
\vol 17
\issue 2
\pages 289--311
\mathnet{http://mi.mathnet.ru/mbb490}
\crossref{https://doi.org/10.17537/2022.17.289}
\elib{https://elibrary.ru/item.asp?id=50158434}
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  • https://www.mathnet.ru/eng/mbb/v17/i2/p289
    • This publication is cited in the following 2 articles:
    1. Michał Rurek, “Mitochondria in COVID-19: from cellular and molecular perspective”, Front. Physiol., 15 (2024)  crossref
    2. M. B. Chalei, V. A. Kutyrkin, “Vybor targeta v genomakh prototipnykh shtammov dlya raspoznavaniya podroda koronavirusov”, Matem. biologiya i bioinform., 18:2 (2023), 267–281  mathnet  crossref
    Citing articles in Google Scholar: Russian citations, English citations
    Related articles in Google Scholar: Russian articles, English articles
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