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Matematicheskaya Biologiya i Bioinformatika, 2020, Volume 15, Issue 2, Pages 172–179
DOI: https://doi.org/10.17537/2020.15.172
(Mi mbb430)
 

This article is cited in 1 scientific paper (total in 1 paper)

Mathematical Modeling

The reaction path of product release in NO detoxification at the active site of truncated hemoglobin N in MCSCF approach

K. V. Simon, A. V. Tulub

Saint Petersburg State University
Full-text PDF (911 kB) Citations (1)
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Abstract: The Multi-Configurational Self-Consistent Field approach with the geometry optimization was applied to the calculation of electronic properties of active site of heme core of truncated hemoglobin N, with the inclusion of [ONOO] functional group and two water molecules. The localized molecular orbitals are employed as a starting set. Two subspaces of full interaction have been used by the construction of MCSCF wavefunction. The first one includes 3d-orbitals of iron atom, and the second contains bonding and antibonding molecular orbitals of peroxynitrite with one unshared electronic pair of the O$_2$ fragment. The reaction is characterized by two transition states; the products are nitrate anion NO$_3^-$ and one unbound water molecule. There arise an evidence of NO$_2$ and NO radicals as the reaction products.
Key words: tubercle bacillus, heme active center, peroxynitrite structure, MCSCF approach, transition states, reaction path, O$_2$/NO chemistry.
Received 19.06.2020, 19.07.2020, Published 03.10.2020
Document Type: Article
Language: English
Citation: K. V. Simon, A. V. Tulub, “The reaction path of product release in NO detoxification at the active site of truncated hemoglobin N in MCSCF approach”, Mat. Biolog. Bioinform., 15:2 (2020), 172–179
Citation in format AMSBIB
\Bibitem{SimTul20}
\by K.~V.~Simon, A.~V.~Tulub
\paper The reaction path of product release in NO detoxification at the active site of truncated hemoglobin N in MCSCF approach
\jour Mat. Biolog. Bioinform.
\yr 2020
\vol 15
\issue 2
\pages 172--179
\mathnet{http://mi.mathnet.ru/mbb430}
\crossref{https://doi.org/10.17537/2020.15.172}
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  • https://www.mathnet.ru/eng/mbb/v15/i2/p172
  • This publication is cited in the following 1 articles:
    Citing articles in Google Scholar: Russian citations, English citations
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    Full-text PDF :46
    References:11
     
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