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This article is cited in 1 scientific paper (total in 1 paper)
Bioinformatics
Structural-statistical properties of DNA coding regions
V. A. Kutyrkina, M. B. Chaleyb a Moscow State Technical University n.a. N.E. Bauman, Moscow, Russia
b Institute of Mathematical Problems of Biology, Russian Academy of Sciences, Pushchino, Russia
Abstract:
Structural-statistical characteristics of the coding DNA sequences (CDSs) from human genome are investigated in the frame of spectral-statistical approach (the 2S-approach). Properties of 3-regularity and latent profile periodicity are among of such the characteristics. Special meaning and intrinsic existence of these properties are confirmed by researching the binary recoded CDSs. The only one kind of singular recoding, that identifies complementary nucleotides, serves to persistence of the original CDSs characteristics. Usage of nonsingular binary recoding proves a statement that latent triplet periodicity in the CDSs of human genome belongs to earlier unknown type called as profile periodicity.
Key words:
latent profile periodicity, spectral-statistical approach, CDS property of 3-regularity, triplet periodicity.
Received 03.09.2015, Published 02.10.2015
Citation:
V. A. Kutyrkin, M. B. Chaley, “Structural-statistical properties of DNA coding regions”, Mat. Biolog. Bioinform., 10:2 (2015), 387–397
Linking options:
https://www.mathnet.ru/eng/mbb233 https://www.mathnet.ru/eng/mbb/v10/i2/p387
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