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Matematicheskaya Biologiya i Bioinformatika, 2015, Volume 10, Issue 1, Pages 260–282
DOI: https://doi.org/10.17537/2015.10.260
(Mi mbb225)
 

This article is cited in 5 scientific papers (total in 5 papers)

Data mining

Maya-K-PDB software for the three-dimensional modeling and visualization of the conformational dynamics of biomacromolecules

S. V. Filippovab, V. S. Sivozhelezovc, V. L. Kimab, V. V. Sychevab, M. N. Ustininab

a Institute of Mathematical Problems of Biology RAS, Pushchino, 142290, Russian Federation
b Pushchino State Institute of Natural Sciences, Pushchino, 142290, Russian Federation
c Institute of Cell Biophysics RAS, Pushchino, 142290, Russian Federation
References:
Abstract: The concept of "active" molecular models was proposed. The Maya-K-PDB software for the creation of active molecular models in the 3D Maya environment was developed. The Maya-K-PDB provides various opportunities for dynamic visualization and modeling of conformational changes of biological macromolecules. Also many complicated processes on molecular level can be presented. The article describes the Maya-K-PDB user interface and illustrates basic examples of software implementation.
Key words: dynamic visualization, molecular model, kinematics, animation.
Funding agency Grant number
Russian Foundation for Basic Research 14-04-01198_а
13-07-00162_а
13-07-12183_офи_м
14-07-00636_а
Russian Academy of Sciences - Federal Agency for Scientific Organizations 43П
Received 15.12.2014, Published 29.06.2015
Document Type: Article
UDC: 577.29
Language: Russian
Citation: S. V. Filippov, V. S. Sivozhelezov, V. L. Kim, V. V. Sychev, M. N. Ustinin, “Maya-K-PDB software for the three-dimensional modeling and visualization of the conformational dynamics of biomacromolecules”, Mat. Biolog. Bioinform., 10:1 (2015), 260–282
Citation in format AMSBIB
\Bibitem{FilSivKim15}
\by S.~V.~Filippov, V.~S.~Sivozhelezov, V.~L.~Kim, V.~V.~Sychev, M.~N.~Ustinin
\paper Maya-K-PDB software for the three-dimensional modeling and visualization of the conformational dynamics of biomacromolecules
\jour Mat. Biolog. Bioinform.
\yr 2015
\vol 10
\issue 1
\pages 260--282
\mathnet{http://mi.mathnet.ru/mbb225}
\crossref{https://doi.org/10.17537/2015.10.260}
Linking options:
  • https://www.mathnet.ru/eng/mbb225
  • https://www.mathnet.ru/eng/mbb/v10/i1/p260
  • This publication is cited in the following 5 articles:
    1. S. V. Filippov, “Metod identifikatsii atomov makromolekul, vizualiziruemykh v 3D redaktorakh”, Preprinty IPM im. M. V. Keldysha, 2019, 097, 10 pp.  mathnet  crossref
    2. I. V. Florinsky, S. V. Filippov, “Three-dimensional terrain modeling with multiple-source illumination”, Trans. GIS, 23:5 (2019), 937–959  crossref  isi  scopus
    3. S. V. Filippov, “Programmnaya platforma Blender kak sreda modelirovaniya ob'ektov i protsessov estestvenno-nauchnykh distsiplin”, Preprinty IPM im. M. V. Keldysha, 2018, 230, 42 pp.  mathnet  crossref  elib
    4. S.V. Filippov, Proceedings of the International Conference “Mathematical Biology and Bioinformatics”, 7, Proceedings of the International Conference “Mathematical Biology and Bioinformatics”, 2018  crossref
    5. S.V. Filippov, V.S. Sivozhelezov, Proceedings of the International Conference “Mathematical Biology and Bioinformatics”, 7, Proceedings of the International Conference “Mathematical Biology and Bioinformatics”, 2018  crossref
    Citing articles in Google Scholar: Russian citations, English citations
    Related articles in Google Scholar: Russian articles, English articles
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    Abstract page:464
    Full-text PDF :369
    References:48
    First page:2
     
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