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Matematicheskaya Biologiya i Bioinformatika, 2012, Volume 7, Issue 2, Pages 567–571
(Mi mbb123)
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Bioinformatics
Elements of RNA Secondary Structures and Their Classification
E. F. Baulinab, T. V. Astakhovaa, M. A. Roytberga a Institute of mathematical problems in biology RAS, 4 Institutskaya, Pushchino, Moscow Region, 142290, Russia
b National Research University Higher School of Economics, 20 Myasnitskaya Ulitsa, Moscow, 101000, Russia
Abstract:
A classification of elements of RNA secondary structure is proposed; the classification generalizes the loop classification given by Mathews and Turner. The classification allows one to describe both hpdeudoknot-free, and psedoknotted structures.
Key words:
RNA, secondary structure, helix, pseudoknot, loop.
Received 22.10.2012, Published 26.10.2012
Citation:
E. F. Baulin, T. V. Astakhova, M. A. Roytberg, “Elements of RNA Secondary Structures and Their Classification”, Mat. Biolog. Bioinform., 7:2 (2012), 567–571
Linking options:
https://www.mathnet.ru/eng/mbb123 https://www.mathnet.ru/eng/mbb/v7/i2/p567
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