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Pis'ma v Zhurnal Èksperimental'noi i Teoreticheskoi Fiziki, 2023, Volume 117, Issue 10, Pages 783–793
DOI: https://doi.org/10.31857/S1234567823100117
(Mi jetpl6949)
 

This article is cited in 2 scientific papers (total in 2 papers)

BIOPHYSICS

Density functional theory, molecular dynamics, and AlteQ studies of baimantuoluoamide A and baimantuoluoamide B to identify potential inhibitors of M$^{\text{pro}}$ proteins: a novel target for the treatment of SARS COVID-19

K. Gurushankarab, S. Ch. Jeyaseelancd, M. Grishinab, I. Siswantoe, R. Tiwarif, N. N. T. Puspaningsihe

a Department of Physics, Kalasalingam Academy of Research and Education, Krishnankoil, Tamilnadu, 626126 India
b Laboratory of Computational Modeling of Drugs, Higher Medical and Biological School, South Ural State University, Chelyabinsk, 454080 Russia
c Post Graduate & Research Department of Physics, N.M.S.S.V.N. College, Madurai, Tamilnadu, 625019 India
d Post Graduate Department of Physics, Mannar Thirumalai Naciker College, Madurai, Tamilnadu, 625004 India
e Universitas Airlangga, 60115 Surabaya, Indonesia
f Department of Physics, Coordinator Research and Development Cell, Dr CV Raman University, Kargi Kota, Bilaspur CG, 495113 India
References:
Abstract: COVID-19 has resulted in epidemic conditions over the world. Despite efforts by scientists from all over the world to develop an effective vaccine against this virus, there is presently no recognized cure for COVID-19. The most succeed treatments for various ailments come from natural components found in medicinal plants, which are also crucial for the development of new medications. This study intends to understand the role of the baimantuoluoamide A and baimantuoluoamide B molecules in the treatment of Covid19. Initially, density functional theory (DFT) used to explore their electronic potentials along with the Becke3–Lee–Yang–Parr (B3LYP) 6-311 + $G(d,p)$ basis set. A number of characteristics, including the energy gap, hardness, local softness, electronegativity, and electrophilicity, have also been calculated to discuss the reactivity of molecules. Using natural bond orbital, the title compound's bioactive nature and stability were investigated. Further, both compounds potential inhibitors with main protease (M$^{\text{pro}}$) proteins, molecular dynamics simulations and AlteQ investigations also studied.
Funding agency Grant number
Russian Foundation for Basic Research 20-53-80002
Dr. K. Gurushankar and Dr. M. Grishina acknowledge the support of the Russian Foundation for Basic Research, Department of Science and Technology (India), and the National Council for Scientific and Technical Development (Brazil), joint project no. 20-53-80002.
Received: 02.01.2023
Revised: 12.04.2023
Accepted: 13.04.2023
English version:
Journal of Experimental and Theoretical Physics Letters, 2023, Volume 117, Issue 10, Pages 781–790
DOI: https://doi.org/10.1134/S0021364023600039
Bibliographic databases:
Document Type: Article
Language: Russian
Citation: K. Gurushankar, S. Ch. Jeyaseelan, M. Grishina, I. Siswanto, R. Tiwari, N. N. T. Puspaningsih, “Density functional theory, molecular dynamics, and AlteQ studies of baimantuoluoamide A and baimantuoluoamide B to identify potential inhibitors of M$^{\text{pro}}$ proteins: a novel target for the treatment of SARS COVID-19”, Pis'ma v Zh. Èksper. Teoret. Fiz., 117:10 (2023), 783–793; JETP Letters, 117:10 (2023), 781–790
Citation in format AMSBIB
\Bibitem{GurJeyGri23}
\by K.~Gurushankar, S.~Ch.~Jeyaseelan, M.~Grishina, I.~Siswanto, R.~Tiwari, N.~N.~T.~Puspaningsih
\paper Density functional theory, molecular dynamics, and AlteQ studies of baimantuoluoamide A and baimantuoluoamide B to identify potential inhibitors of M$^{\text{pro}}$ proteins: a novel target for the treatment of SARS COVID-19
\jour Pis'ma v Zh. \`Eksper. Teoret. Fiz.
\yr 2023
\vol 117
\issue 10
\pages 783--793
\mathnet{http://mi.mathnet.ru/jetpl6949}
\crossref{https://doi.org/10.31857/S1234567823100117}
\edn{https://elibrary.ru/coeqll}
\transl
\jour JETP Letters
\yr 2023
\vol 117
\issue 10
\pages 781--790
\crossref{https://doi.org/10.1134/S0021364023600039}
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  • This publication is cited in the following 2 articles:
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    Письма в Журнал экспериментальной и теоретической физики Pis'ma v Zhurnal Иksperimental'noi i Teoreticheskoi Fiziki
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    Abstract page:58
    References:23
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