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Preprints of the Keldysh Institute of Applied Mathematics, 2018, 232, 12 pp.
DOI: https://doi.org/10.20948/prepr-2018-232 (Mi ipmp2590) 		 
Investigation of DNA denaturation in Peyrard-Bishop-Dauxois model by molecular dynamics method

I. V. Likhachev, V. D. Lakhno
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DOI: https://doi.org/10.20948/prepr-2018-232
Abstract: The phase transition of (PolyA/PolyT)100 duplex into the denaturated state is studied in the Peyrard–Bishop–Dauxois model by the method of direct molecular-dynamical modeling. The temperature dependencies of the total energy and heat capacity of the duplex are calculated. The approach applied can be used to calculate the statistical properties of the duplexes of any length and nucleotide composition.
Keywords: one-dimensional DNA modeling, homogeneous nucleotide sequence, collisional thermostat.
Funding agency Grant number
Russian Science Foundation 16-11-10163
Bibliographic databases:
Document Type: Preprint
Language: Russian
Citation: I. V. Likhachev, V. D. Lakhno, “Investigation of DNA denaturation in Peyrard-Bishop-Dauxois model by molecular dynamics method”, Keldysh Institute preprints, 2018, 232, 12 pp.
Citation in format AMSBIB
\Bibitem{LikLak18}
\by I.~V.~Likhachev, V.~D.~Lakhno
\paper Investigation of DNA denaturation in Peyrard-Bishop-Dauxois model by molecular dynamics method
\jour Keldysh Institute preprints
\yr 2018
\papernumber 232
\totalpages 12
\mathnet{http://mi.mathnet.ru/ipmp2590}
\crossref{https://doi.org/10.20948/prepr-2018-232}
\elib{https://elibrary.ru/item.asp?id=36458526}
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    		Препринты Института прикладной математики им. М. В. Келдыша РАН
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