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Informatika i Ee Primeneniya [Informatics and its Applications], 2022, Volume 16, Issue 2, Pages 35–43
DOI: https://doi.org/10.14357/19922264220205
(Mi ia784)
 

This article is cited in 2 scientific papers (total in 2 papers)

On the application of a topological approach to analysis of poorly formalized problems for constructing algorithms for virtual screening of quantum-mechanical properties of organic molecules II: Comparison of formalism with constructions of quantum mechanics and experimental approbation of the proposed algorithms

I. Yu. Torshin

Federal Research Center “Computer Science and Control” of the Russian Academy of Sciences, 44-2 Vavilov Str., Moscow 119333, Russian Federation
Full-text PDF (409 kB) Citations (2)
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Abstract: Correspondences between descriptions of molecules in the framework of the theory of chemographs, internal coordinates of molecules, and $\psi$-functions are shown. The results obtained are comparable: ($i$) with the solutions of the one-electron Schrödinger equation on fragments of molecules with allowance for the overlap of fragments; ($ii$) with additive schemes for calculating electron density in the electron density functional theory; and ($iii$) with allowance for overlap integrals in the theory of molecular orbitals. Approbation of the algorithms on a sample of 134 thousand organic molecules showed rank correlations of the order of 0.75 (95%, reliable interval 0.67–0.85) between the results of calculations using the proposed algorithms and the values of the investigated quantum mechanical properties of molecules. The calculation speed of the proposed algorithms is several orders of magnitude higher than the speed of quantum mechanical calculations which is important for screening the molecules.
Keywords: algebraic approach, chemoinformatics, labeled graphs, combinatorial solvability analysis.
Funding agency Grant number
Russian Foundation for Basic Research 19-07-00356
18-07-00944
20-07-00537
This work was supported in part by RFBR grants 19-07-00356, 18-07-00944, and 20-07-00537.
Received: 05.04.2021
Document Type: Article
Language: Russian
Citation: I. Yu. Torshin, “On the application of a topological approach to analysis of poorly formalized problems for constructing algorithms for virtual screening of quantum-mechanical properties of organic molecules II: Comparison of formalism with constructions of quantum mechanics and experimental approbation of the proposed algorithms”, Inform. Primen., 16:2 (2022), 35–43
Citation in format AMSBIB
\Bibitem{Tor22}
\by I.~Yu.~Torshin
\paper On the application of a topological approach to analysis of poorly formalized problems for constructing algorithms for virtual screening of quantum-mechanical properties of organic molecules II:~Comparison of formalism with constructions of quantum mechanics and experimental approbation of the proposed algorithms
\jour Inform. Primen.
\yr 2022
\vol 16
\issue 2
\pages 35--43
\mathnet{http://mi.mathnet.ru/ia784}
\crossref{https://doi.org/10.14357/19922264220205}
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  • https://www.mathnet.ru/eng/ia/v16/i2/p35
  • This publication is cited in the following 2 articles:
    Citing articles in Google Scholar: Russian citations, English citations
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    Информатика и её применения
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