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Fundamentalnaya i Prikladnaya Matematika, 2015, Volume 20, Issue 3, Pages 33–46
(Mi fpm1651)
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Analyzing the data bank of proteins' space structures (PDB): a geometrical approach
E. A. Vilkul, A. O. Ivanov, A. S. Mishchenko, Th. Yu. Popelenskii, A. A. Tuzhilin, K. V. Shaytan Lomonosov Moscow State University
Abstract:
A geometrical approach to the analysis of a data bank containing information on space structures of proteins is suggested. As a result of the analysis, several relationships concerning possible conformations are found, and also there is obtained a list of polypeptides whose structures differ essentially from typical concepts of the 3D-structure of proteins. Those deviations could indicate possible errors and gaps of the interpreting models in use, as well as some new unknown relations and rules.
Citation:
E. A. Vilkul, A. O. Ivanov, A. S. Mishchenko, Th. Yu. Popelenskii, A. A. Tuzhilin, K. V. Shaytan, “Analyzing the data bank of proteins' space structures (PDB): a geometrical approach”, Fundam. Prikl. Mat., 20:3 (2015), 33–46; J. Math. Sci., 225:4 (2017), 555–564
Linking options:
https://www.mathnet.ru/eng/fpm1651 https://www.mathnet.ru/eng/fpm/v20/i3/p33
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Abstract page: | 366 | Full-text PDF : | 186 | References: | 45 |
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