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This article is cited in 4 scientific papers (total in 4 papers)
ANALYSIS AND MODELING OF COMPLEX LIVING SYSTEMS
Homology modeling of the spatial structure of HydSL hydrogenase from purple sulphur bacterium Thiocapsa roseopersicina BBS
A. V. Abdullatypov, A. A. Tsygankov Institute of basic biological problems RAS, 2 Institutskaya str., Pushchino, Moscow oblast, 142290, Russia
Abstract:
The results of homology modeling of HydSL, a NiFe-hydrogenase from purple sulphur bacterium Thiocapsa roseopersicina BBS are presented in this work. It is shown that the models have larger confidence level than earlier published ones; a full-size model of HydSL hydrogenase is presented for the first time. The C-end fragment of the enzyme is shown to have random orientation in relation to the main protein globule. The obtain models have a large number of ion pairs, as well as thermostable HydSL hydrogenase from Allochromatium vinosum, in contrast to thermolabile HydAB hydrogenase from Desulfovibrio vulgaris.
Keywords:
Thiocapsa roseopersicina, homology modeling, hydrogenases, Thiocapsa roseopersicina.
Received: 06.03.2013 Revised: 01.07.2013
Citation:
A. V. Abdullatypov, A. A. Tsygankov, “Homology modeling of the spatial structure of HydSL hydrogenase from purple sulphur bacterium Thiocapsa roseopersicina BBS”, Computer Research and Modeling, 5:4 (2013), 737–747
Linking options:
https://www.mathnet.ru/eng/crm431 https://www.mathnet.ru/eng/crm/v5/i4/p737
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Abstract page: | 93 | Full-text PDF : | 58 | References: | 24 |
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