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Computer Research and Modeling, 2013, Volume 5, Issue 1, Pages 65–81
DOI: https://doi.org/10.20537/2076-7633-2013-5-1-65-81
(Mi crm382)
 

This article is cited in 9 scientific papers (total in 9 papers)

ANALYSIS AND MODELING OF COMPLEX LIVING SYSTEMS

Combination of different simulation techniques in the complex model of photosynthetic membrane

D. M. Ustinin, I. B. Kovalenko, G. Yu. Riznichenko, A. B. Rubin

Moscow State University, Faculty of Biology, MSU, GSP-1, Leninskiye Gory, Moscow, 119991, Russia
References:
Abstract: Complex geometric organization of subcellular structures such as photosynthetic or mitochondrial membranes determines mechanism of electron and proton transfer processes. We propose new approach in modeling processes, where geometric shape of membranes is accurately taken into account. Different stages of charge transfer process are simulated using different approaches, which are integrated into a combined model. We implemented this model as software which utilizes parallel computations on high-performance clusters and GPUs for better performance.
Keywords: computer modeling, Brownian dynamics.
Funding agency Grant number
Russian Foundation for Basic Research 11-04-01019
11-04-01268
12-07-00783
12-07-33036
Received: 18.12.2012
Revised: 01.03.2013
Document Type: Article
UDC: 519.8
Language: Russian
Citation: D. M. Ustinin, I. B. Kovalenko, G. Yu. Riznichenko, A. B. Rubin, “Combination of different simulation techniques in the complex model of photosynthetic membrane”, Computer Research and Modeling, 5:1 (2013), 65–81
Citation in format AMSBIB
\Bibitem{UstKovRiz13}
\by D.~M.~Ustinin, I.~B.~Kovalenko, G.~Yu.~Riznichenko, A.~B.~Rubin
\paper Combination of different simulation techniques in the complex model of photosynthetic membrane
\jour Computer Research and Modeling
\yr 2013
\vol 5
\issue 1
\pages 65--81
\mathnet{http://mi.mathnet.ru/crm382}
\crossref{https://doi.org/10.20537/2076-7633-2013-5-1-65-81}
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  • https://www.mathnet.ru/eng/crm/v5/i1/p65
  • This publication is cited in the following 9 articles:
    Citing articles in Google Scholar: Russian citations, English citations
    Related articles in Google Scholar: Russian articles, English articles
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